University of Tartu Announces Research Fellow Position in Plant Genomics and Breeding in Estonia
The University of Tartu, one of Northern Europe’s leading research institutions, is inviting applications for a Research Fellow in Plant Genomics and Breeding. This exciting opportunity is ideal for early-career and experienced researchers interested in advancing plant and tree genomics through cutting-edge genomic technologies and multi-omics approaches.
The successful candidate will contribute to an ambitious research program focused on understanding the genetic basis of tree adaptation, specialized metabolism, biodiversity, and breeding improvement. The application deadline is 1 July 2026 at 11:59 (Europe/Tallinn).
Position Overview
| Position | Research Fellow in Plant Genomics and Breeding |
|---|---|
| Institution | University of Tartu |
| Location | Tartu, Estonia |
| Employment Type | Full-Time |
| Workload | 1.0 FTE |
| Contract Start Date | 1 September 2026 |
| Research Area | Plant Genomics and Breeding |
| Application Deadline | 1 July 2026 |
| Language Requirement | English |
| Annual Leave | 42 Paid Vacation Days |
About the Research Project
The research program combines several advanced disciplines within modern plant science, including:
- Genome assembly
- Comparative genomics
- Population genomics
- Transcriptomics
- Metabolomics
- Genomic selection
- Tree breeding
- Multi-omics integration
The primary objective is to identify genomic mechanisms associated with:
- Tree adaptation
- Specialized metabolism
- Biodiversity conservation
- Breeding improvement
- Trait-associated genetic variation
The project aims to translate fundamental genomic discoveries into practical applications that support future breeding programs and sustainable forestry initiatives.
Key Responsibilities
The selected Research Fellow will play a central role in generating and analyzing advanced genomic resources. Main responsibilities include: Genome Assembly and Annotation:
- Develop high-quality plant genome assemblies
- Generate chromosome-scale genomic resources
- Perform genome annotation and comparative analyses
- Support near telomere-to-telomere (T2T) assembly initiatives
Multi-Omics Data Integration
The researcher will integrate:
- Genomic data
- Transcriptomic datasets
- Metabolomic profiles
- Phenotypic information
These analyses will help uncover the molecular basis of important biological traits.
Trait Discovery and Breeding Applications
The successful candidate will contribute to:
- Identification of trait-associated genes
- Understanding adaptation mechanisms
- Development of breeding-focused genomic tools
- Translation of genomic discoveries into practical improvement strategies
Experimental Validation
Depending on expertise and project needs, additional responsibilities may include:
- Candidate gene validation
- Regulatory interaction studies
- Biosynthetic pathway characterization
- Functional genomics experiments
Required Qualifications
Applicants must possess: Educational Background:
- PhD in Plant Genomics
- PhD in Bioinformatics
- PhD in Genetics
- PhD in Molecular Biology
- PhD in Plant Breeding
- Or an equivalent related qualification
Essential Technical Expertise
Candidates should demonstrate strong experience in the following areas.
Plant Genome Assembly and Annotation
Experience with:
- Long-read sequencing technologies
- Genome assembly pipelines
- Chromosome-scale assemblies
- Hi-C or Omni-C scaffolding
- Genome annotation workflows
Large-Scale Data Analysis
Applicants should have expertise in handling and analyzing:
- Genomic datasets
- Sequencing data
- Multi-omics datasets
- High-throughput biological data
Specialized Research Expertise
Candidates should possess expertise in at least one of the following:
- Comparative Genomics
- Population Genomics
- Transcriptomics
- Metabolomics Integration
- Genome-Wide Association Studies (GWAS)
- Genomic Selection
Preferred Qualifications
The University of Tartu particularly welcomes candidates with additional experience in:
Genome Resource Development
- High Molecular Weight (HMW) DNA extraction
- Omni-C library preparation
- Hi-C library generation
- Advanced sequencing workflows
Molecular Validation Techniques, Experience with:
- Y1H (Yeast One-Hybrid)
- Y2H (Yeast Two-Hybrid)
- EMSA
- qPCR
- Transient expression assays
Plant Breeding and Genetics
Knowledge of:
- Association genetics
- Core germplasm analysis
- Breeding population studies
- Genomic prediction methods
Artificial Intelligence and Computational Biology
Experience with:
- Machine learning applications
- AI-assisted bioinformatics
- Workflow automation
- Large-scale biological data mining
These skills are increasingly valuable in modern genomics research and can significantly strengthen an application.
Ideal Candidate Profile
The successful applicant should demonstrate:
- Professionalism
- Scientific curiosity
- Strong work ethic
- Dedication to research excellence
- Excellent teamwork skills
- Effective scientific communication abilities
- Capacity to work independently and collaboratively
The role requires close interaction with multidisciplinary teams spanning computational biology, molecular genetics, genomics, and breeding research.
Language Requirements
Applicants must possess: English
- Excellent written English
- Excellent spoken English
Estonian Language Requirement
According to Estonian legislation, academic employees with foreign citizenship are expected to achieve at least B1-level Estonian language proficiency within five years of employment. To support international researchers, the University of Tartu provides access to Estonian language courses through its Centre for Professional Development.
Required Application Documents
Candidates must submit the following documents: Mandatory Documents:
- Application letter addressed to the Rector
- Curriculum Vitae (CV)
- List of scientific publications
- Degree certificate and academic transcripts
- Official translations where required
- Additional supporting materials relevant to the application
Applicants with qualifications earned outside Estonia may be asked to provide credential recognition documentation from the Estonian ENIC/NARIC center.
Employee Benefits
The University of Tartu offers an attractive employment package that supports both professional growth and work-life balance. Benefits include: Professional Development:
- Research training opportunities
- Career advancement support
- International collaboration opportunities
- Access to world-class research infrastructure
Work-Life Balance
- Flexible working arrangements
- Supportive academic environment
- International workplace culture
- Annual Leave; Researchers receive: 42 days of paid annual leave per year, This is significantly higher than standard leave allowances in many countries and represents a valuable employment benefit.
Why Consider the University of Tartu?
The University of Tartu is widely recognized as one of the leading research universities in the Baltic region. Advantages include:
- Strong international reputation
- Cutting-edge genomics research facilities
- Collaborative scientific environment
- Access to advanced sequencing technologies
- Opportunities to work on globally relevant biodiversity and breeding challenges
For researchers interested in plant genetics, tree biology, genomics, and breeding innovation, this position offers an excellent platform for long-term academic and professional development.
Important Dates
| Event | Date |
| Application Deadline | 1 July 2026 |
| Deadline Time | 11:59 (Europe/Tallinn) |
| Contract Start Date | 1 September 2026 |
How to Apply
Interested candidates should prepare all required documentation and submit their application before the closing date. Application Portal: https://ut.recrur.com/public/link/tartu-ulikool-taimegenoomika-ja-sordiaretuse-teadurresearch-fellow-in-plant-genomics-and-breeding/02c6e85b-c
Applicants are encouraged to apply early to avoid last-minute submission issues.
Frequently Asked Questions (FAQs)
Who can apply for the Research Fellow position?
Researchers holding a PhD in plant genomics, genetics, bioinformatics, molecular biology, plant breeding, or a closely related discipline are eligible to apply.
Is this position open to international applicants?
Yes. The University of Tartu welcomes applications from qualified researchers worldwide.
What is the application deadline?
Applications must be submitted by 1 July 2026 at 11:59 (Europe/Tallinn).
What research areas are covered by the project?
The project focuses on plant genomics, tree genomics, comparative genomics, transcriptomics, metabolomics, genomic selection, and breeding research.
Is experience with genome assembly required?
Yes. Applicants should have demonstrated experience with plant genome assembly, annotation, and large-scale sequencing data analysis.
Are machine learning skills considered valuable?
Yes. Experience with machine learning, AI-assisted bioinformatics, and workflow automation is listed as a desirable qualification.
What employee benefits are offered?
Benefits include flexible working arrangements, professional development opportunities, an international research environment, and 42 days of paid annual leave.
Is knowledge of Estonian required before applying?
No. However, foreign academic staff are expected to achieve B1-level Estonian language proficiency within five years of employment.
What types of genomic technologies are emphasized in the project?
The project uses long-read sequencing, chromosome-scale assembly approaches, Hi-C and Omni-C technologies, comparative genomics, and multi-omics integration.
When does the position begin?
The planned contract start date is 1 September 2026.
Additional information
Job description, incl. requirements for academic staff.
More information about application documents.
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