Scientists in lab coats working with advanced microbiome research equipment in a modern lab
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3 PhD Positions on Sustainability Transitions Through Microbiome Innovations at VU Amsterdam, Netherlands

Are you interested in transforming food and health systems through innovative research? The Vrije Universiteit Amsterdam (VU Amsterdam) is recruiting three PhD candidates for the Holomicrobiome project, an interdisciplinary research initiative focused on how microbiome innovations can contribute to sustainable and healthy societies. The PhD positions are hosted by the Athena Institute, which studies complex societal challenges through transdisciplinary research, stakeholder collaboration, and system transformation approaches.

The project investigates how microbiome-based innovations can accelerate transitions toward sustainable food systems, improved health outcomes, and economic development. Funded by the Dutch National Growth Fund, Holomicrobiome brings together researchers, policymakers, businesses, and societal stakeholders to develop future-oriented innovation pathways.


Position Overview

CategoryDetails
Position3 PhD Candidate Positions
Research AreaSustainability transitions through microbiome innovations
Host InstitutionVrije Universiteit Amsterdam
ProjectHolomicrobiome
Research FieldSustainability science, innovation studies, governance, social sciences
LocationAmsterdam, Netherlands
Employment LevelFull-time (1 FTE)
Salary€3,059 – €3,881 gross/month
ContractInitially 1 year, possible extension
Application Deadline14 August 2026
Expected Interview PeriodAugust–September 2026

About the Holomicrobiome Project

Microbiomes play an increasingly important role in developing solutions for global challenges in food production, agriculture, and human health. The Holomicrobiome project aims to develop microbiome innovations that support:

  • Sustainable food systems
  • Healthy lifestyles
  • Circular production models
  • Economic opportunities
  • Scientific and societal collaboration

However, technological innovation alone is not enough to create lasting change. Successful sustainability transitions require effective governance, collaboration between stakeholders, supportive policies, and viable business models. The project therefore examines how innovation ecosystems can be designed and governed to achieve transformative societal impact.


Research Themes and Available PhD Projects

VU Amsterdam is recruiting three PhD candidates, each focusing on a different research theme.


PhD Position 1: Policy and Governance for Sustainability Transitions

This PhD candidate will investigate how policies and governance approaches can support microbiome innovation systems in the Netherlands. Research topics include:

  • Mission-oriented innovation systems
  • Policy development and implementation
  • Government roles in sustainability transitions
  • Governance strategies for large-scale innovation projects
  • Theories of Change and transition pathways

Possible research questions:

  • How can governments effectively support microbiome innovation ecosystems?
  • Which policy mixes encourage transformative innovation?
  • How can mission-oriented projects be governed successfully?

PhD Position 2: Transdisciplinary Collaboration and Learning in Innovation Systems

This PhD position focuses on how researchers, businesses, policymakers, and societal actors can collaborate to create transformative change. The candidate will study:

  • Transdisciplinary innovation ecosystems
  • Stakeholder learning processes
  • Knowledge exchange between science and society
  • Power relations between organizations
  • Monitoring transformative impacts

Research questions may include:

  • How can collaborative learning accelerate sustainability transitions?
  • How can innovation ecosystems support long-term transformation?
  • How can societal impact be measured?

PhD Position 3: Valorisation and Institutional Entrepreneurship for Microbiome Innovations

This PhD candidate will explore how microbiome innovations can move from research environments into practical applications. Research areas include:

  • Business model development
  • Institutional entrepreneurship
  • Market challenges
  • Regulatory barriers
  • Value creation strategies

The research may focus on applications in:

  • Human health
  • Agriculture
  • Food systems

Possible research questions:

  • How can businesses create sustainable value from microbiome innovations?
  • What barriers influence commercialisation?
  • Which strategies enable successful innovation adoption?

PhD Research Approach

The PhD candidates will conduct action-oriented qualitative research using methods such as:

  • Interviews
  • Focus groups
  • Ethnographic research
  • Stakeholder workshops
  • Comparative case studies
  • Document analysis

The Holomicrobiome project itself will serve as both:

  • The research context
  • The research object

Candidates will collaborate closely with the wider project team and develop scientific publications that form the basis of their PhD thesis.


Main Responsibilities

Selected PhD researchers will:

Conduct Research

  • Design and execute qualitative research studies
  • Analyse sustainability transition processes
  • Collaborate with project stakeholders
  • Develop academic publications

Support Project Activities

Responsibilities include:

  • Organising Living Labs
  • Supporting stakeholder workshops
  • Contributing to consortium meetings
  • Developing monitoring approaches
  • Supporting project activities

Academic Development

PhD candidates will:

  • Present research at conferences
  • Follow formal PhD training courses
  • Develop advanced research skills
  • Contribute to teaching activities at Athena Institute

Teaching responsibilities will be approximately 0.2 FTE.


Candidate Requirements

Applicants should have:

  • A completed Master’s degree in:
    • Innovation studies
    • Sustainable transformation
    • Policy sciences
    • Organisation sciences
    • Management and entrepreneurship
    • Another relevant interdisciplinary social science field

Candidates with combined backgrounds in natural sciences and social sciences are especially encouraged to apply.


Required Skills and Experience

Applicants should demonstrate:

  • Experience with qualitative research methods
  • Interest in interdisciplinary and transdisciplinary research
  • Ability to collaborate with diverse stakeholders
  • Strong organisational skills
  • Excellent communication abilities
  • Experience with academic writing and presentations

Relevant research experience includes:

  • Interviews
  • Ethnography
  • Focus groups
  • Workshop facilitation

Language Requirements

Applicants must have:

  • Excellent English proficiency

Dutch language skills are highly appreciated because of stakeholder engagement within the Netherlands. These PhD positions offer the opportunity to:

  • Work on a globally relevant sustainability challenge
  • Study the future of food and health innovation
  • Collaborate with scientists, policymakers, and industry partners
  • Develop expertise in sustainability transitions
  • Conduct research with direct societal impact
  • Build an international academic profile

Salary and Employment Benefits

The PhD positions provide a competitive university employment package.

Salary

Gross monthly salary:

  • Minimum: €3,059
  • Maximum: €3,881

Salary depends on education level and experience.

Benefits Include:

  • Full-time 38-hour working week
  • 232 holiday hours annually
  • 8% holiday allowance
  • 8.3% end-of-year bonus
  • ABP pension scheme
  • Campus childcare facilities
  • Possibility of hybrid working

About Athena Institute and VU Amsterdam

The Athena Institute focuses on addressing complex societal challenges related to:

  • Health
  • Food systems
  • Agriculture
  • Climate change
  • Social justice

Its research approach combines academic excellence with collaboration between scientists, policymakers, communities, and organisations. The Faculty of Science at VU Amsterdam supports interdisciplinary research addressing major global challenges, from environmental sustainability to biotechnology and health. VU Amsterdam promotes an inclusive academic environment where diversity of backgrounds, perspectives, and experiences contributes to innovation and research quality.


Application Process

Applicants must submit:

  1. Curriculum vitae (CV)
  2. Motivation letter (maximum one A4 page)
  3. A motivated choice of one or more PhD topics
  4. A short research outline describing their proposed research direction (maximum one A4 page)
  5. Applications submitted by email will not be considered.
  6. The deadline for applications is 14 August 2026.
  7. APPLY NOW ONLINE
  8. The recruitment process includes: First interview round: End of August / beginning of September 2026 & Second interview round: September 2026

Frequently Asked Questions (FAQ)

1. How many PhD positions are available in the Holomicrobiome project?

VU Amsterdam is recruiting three PhD candidates, each focusing on a different research theme related to microbiome innovation and sustainability transitions.


2. What is the main focus of the PhD project?

The project studies how microbiome innovations can contribute to sustainable food systems, healthier societies, and economic development through effective governance and innovation strategies.


3. Is this a funded PhD position?

Yes. The positions are university-funded PhD employment contracts with salaries ranging from €3,059 to €3,881 gross per month.


4. Who can apply for these PhD positions?

Applicants with a Master’s degree in innovation studies, sustainability, policy sciences, organisation sciences, management, entrepreneurship, or related interdisciplinary social sciences can apply.


5. Are candidates with science backgrounds eligible?

Yes. Applicants with combined natural science and social science backgrounds are especially encouraged.


6. What research methods will be used?

The research will mainly involve qualitative methods, including interviews, workshops, focus groups, ethnographic approaches, and case studies.


7. Will the PhD candidates work with external stakeholders?

Yes. The project involves collaboration with scientists, companies, policymakers, and societal organisations through Living Labs and stakeholder activities.


8. Is Dutch language required?

English proficiency is required. Dutch language skills are highly appreciated but not listed as mandatory.


9. When is the application deadline?

The deadline for applications is 14 August 2026.


10. Where will the PhD research take place?

The positions are based at VU Amsterdam in the Netherlands, with research activities involving Dutch microbiome innovation networks.


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